aguirreg

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==== Links to software packages ====
We use several different tools in the lab to process neuroimaging data. Links are provided below to websites for several of these packages:

  * [[http://www.fmrib.ox.ac.uk/fsl/|FSL]]
  * [[http://surfer.nmr.mgh.harvard.edu/optseq/|Optseq]]
  * [[http://www.brainvoyager.com/|BrainVoyager]]
  * [[http://www.fil.ion.ucl.ac.uk/spm/|Statistical Parametric Mapping (SPM)]]
  * [[http://voxbo.org|VoxBo]]

The Penn Center for functional Neuroimaging (CfN) maintains a wiki with a page listing the installed software packages on our cluster:

  * [[https://cfn.upenn.edu/computing/wiki/|CfN Cluster wiki]]

==== Computers available for remote login ====

A list of the CfN computers for remote login is stored at:

[[https://cfn.upenn.edu/hosts.txt|cfn.upenn.edu/hosts.txt]]
==== Information regarding the compute cluster ====

A list of the CPUs available as part of the CfN cluster is available in this file:

<code>/jet/admin/machineinfo/machineinfo.html</code>

The status of the CPUs as of 06/28/2010 can be found [[private:cpu_machineinfo|here]] PAGELOCKED.

==== Connecting to the cluster file system on a Mac ====

Use the ''Finder --> Go --> Connect to Server (⌘K)'' menu command to activate the server dialog. Enter

  nfs://170.212.110.72/jet/aguirre

The IP address is for the file server ''newslim''.

aguirreg

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